STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBR_g10859Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
CBR_g39765
Uncharacterized protein.
     
 0.634
CBR_g31987
Uncharacterized protein.
     
 0.562
CBR_g41305
Uncharacterized protein.
     
 0.560
CBR_g10855
Uncharacterized protein.
     
 0.486
CBR_g48370
Uncharacterized protein.
     
 0.464
MED6
Mediator of RNA polymerase II transcription subunit 6; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.447
CBR_g44444
Med12 domain-containing protein.
     
 0.434
CBR_g19290
Uncharacterized protein.
     
 0.430
CBR_g48048
Uncharacterized protein.
     
 0.430
Your Current Organism:
Chara braunii
NCBI taxonomy Id: 69332
Other names: C. braunii
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