Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OBV_26790 | OBV_35660 | OBV_26790 | OBV_35660 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Putative hydrolase. | 0.906 |
OBV_26790 | OBV_39970 | OBV_26790 | OBV_39970 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase YfbR. | 0.906 |
OBV_26790 | cdd | OBV_26790 | OBV_06130 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.922 |
OBV_26790 | deoD | OBV_26790 | OBV_35900 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Purine nucleoside phosphorylase. | 0.901 |
OBV_26790 | deoD-2 | OBV_26790 | OBV_37640 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Purine nucleoside phosphorylase. | 0.901 |
OBV_26790 | dut | OBV_26790 | OBV_46300 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.900 |
OBV_26790 | tdk | OBV_26790 | OBV_37130 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.918 |
OBV_26790 | thyA | OBV_26790 | OBV_13640 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.904 |
OBV_26790 | udp | OBV_26790 | OBV_06750 | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.915 |
OBV_35660 | OBV_26790 | OBV_35660 | OBV_26790 | Putative hydrolase. | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.906 |
OBV_35660 | OBV_39970 | OBV_35660 | OBV_39970 | Putative hydrolase. | 5'-nucleotidase YfbR. | 0.900 |
OBV_35660 | dut | OBV_35660 | OBV_46300 | Putative hydrolase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. | 0.951 |
OBV_35660 | tdk | OBV_35660 | OBV_37130 | Putative hydrolase. | Thymidine kinase. | 0.934 |
OBV_35660 | thyA | OBV_35660 | OBV_13640 | Putative hydrolase. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.935 |
OBV_35660 | udp | OBV_35660 | OBV_06750 | Putative hydrolase. | Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. | 0.585 |
OBV_39970 | OBV_26790 | OBV_39970 | OBV_26790 | 5'-nucleotidase YfbR. | Putative 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 0.906 |
OBV_39970 | OBV_35660 | OBV_39970 | OBV_35660 | 5'-nucleotidase YfbR. | Putative hydrolase. | 0.900 |
OBV_39970 | cdd | OBV_39970 | OBV_06130 | 5'-nucleotidase YfbR. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.903 |
OBV_39970 | deoD | OBV_39970 | OBV_35900 | 5'-nucleotidase YfbR. | Purine nucleoside phosphorylase. | 0.903 |
OBV_39970 | deoD-2 | OBV_39970 | OBV_37640 | 5'-nucleotidase YfbR. | Purine nucleoside phosphorylase. | 0.903 |
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