STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_43770iron(III) ABC transporter iron(III)-binding protein. (356 aa)    
Predicted Functional Partners:
OBV_43750
iron(III) ABC transporter permease protein.
 
 
 0.997
OBV_43760
iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.987
OBV_26820
Putative two-component histidine kinase.
 
 
   0.837
OBV_43730
Putative two-component response regulator.
 
     0.835
OBV_17570
Putative two-component histidine kinase.
 
 
   0.652
OBV_43740
Putative two-component histidine kinase.
 
     0.649
OBV_03560
Putative two-component histidine kinase.
   
   0.602
OBV_07230
Putative two-component histidine kinase.
   
   0.602
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
  
 0.597
modB
Putative molybdate ABC transporter permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
  0.518
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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