node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADV43057.1 | rplA | Bache_1047 | Bache_1046 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.999 |
ADV43057.1 | rplB | Bache_1047 | Bache_1059 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.988 |
ADV43057.1 | rplD | Bache_1047 | Bache_1057 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.997 |
ADV43057.1 | rplK | Bache_1047 | Bache_1045 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.996 |
ADV43057.1 | rplM | Bache_1047 | Bache_0147 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
ADV43057.1 | rpsE | Bache_1047 | Bache_1073 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.984 |
ADV43057.1 | rpsG | Bache_1047 | Bache_1053 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.985 |
ADV43057.1 | rpsJ | Bache_1047 | Bache_1055 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.984 |
ADV43057.1 | tsf | Bache_1047 | Bache_0144 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.842 |
ADV43057.1 | tuf | Bache_1047 | Bache_1042 | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.986 |
rplA | ADV43057.1 | Bache_1046 | Bache_1047 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | COGs: COG0244 Ribosomal protein L10; InterPro IPR001790; KEGG: bfr:BF4194 50S ribosomal protein L10; PFAM: ribosomal protein L10; SPTR: Predicted protein; PFAM: Ribosomal protein L10. | 0.999 |
rplA | rplB | Bache_1046 | Bache_1059 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.987 |
rplA | rplD | Bache_1046 | Bache_1057 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.995 |
rplA | rplK | Bache_1046 | Bache_1045 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplM | Bache_1046 | Bache_0147 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.992 |
rplA | rpsE | Bache_1046 | Bache_1073 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.986 |
rplA | rpsG | Bache_1046 | Bache_1053 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.985 |
rplA | rpsJ | Bache_1046 | Bache_1055 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.985 |
rplA | tsf | Bache_1046 | Bache_0144 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family. | 0.870 |
rplA | tuf | Bache_1046 | Bache_1042 | LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.989 |