STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001038425_00250Unannotated protein. (171 aa)    
Predicted Functional Partners:
GCA_001038425_00266
Unannotated protein.
   
 0.792
GCA_001038425_00249
Unannotated protein.
     
 0.657
GCA_001038425_00925
Unannotated protein.
     
 0.524
GCA_001038425_00500
Unannotated protein.
  
  
 0.466
GCA_001038425_00802
Unannotated protein.
  
 
 0.462
GCA_001038425_03341
Unannotated protein.
  
 
 0.462
GCA_001038425_00248
Unannotated protein.
       0.439
GCA_001038425_00251
Unannotated protein.
       0.432
GCA_001038425_01449
Unannotated protein.
    
  0.428
GCA_001038425_02004
Unannotated protein.
    
  0.428
Your Current Organism:
Ornithinibacillus contaminans
NCBI taxonomy Id: 694055
Other names: CCUG 53201, DSM 22953, O. contaminans, Ornithinibacillus contaminans Kampfer et al. 2010, Ornithinibacillus sp. CCUG 53201
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.