STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0352Aldehyde ferredoxin oxidoreductase. (705 aa)    
Predicted Functional Partners:
DFW101_0351
Uncharacterized protein.
 
  
 0.976
DFW101_0353
Iron-sulfur binding protein.
 
 0.975
DFW101_0512
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
 0.907
DFW101_0534
Formate dehydrogenase beta subunit.
 
 0.863
DFW101_1498
Putative formate dehydrogenase, beta subunit.
 
 0.861
DFW101_3451
Iron-sulfur binding protein.
   
 
 0.859
DFW101_1273
Molybdopterin oxidoreductase iron-sulfur cluster-binding subunit.
 
 0.857
DFW101_3095
Iron-sulfur binding protein.
 
 0.857
DFW101_0367
HMC operon ORF 2 protein.
  
 0.838
DFW101_1867
Iron-sulfur binding protein.
  
 0.838
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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