STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_0983DoxX family protein. (139 aa)    
Predicted Functional Partners:
DFW101_0984
Rhodanese-like protein.
 
   
 0.933
DFW101_0982
Regulatory protein TetR.
     
 0.776
DFW101_1505
Methylamine utilization MauE.
  
     0.767
DFW101_0981
Enoyl-[acyl-carrier-protein] reductase [NADH].
       0.750
DFW101_0985
Rhodanese-like protein.
     
 0.617
DFW101_1329
ATPase, P-type (Transporting), HAD superfamily, subfamily IC.
    
 0.569
DFW101_0986
Uncharacterized protein.
       0.537
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.535
DFW101_0987
Uncharacterized protein.
       0.517
DFW101_0045
Cadmium-translocating P-type ATPase.
  
  
 0.477
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.