Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DFW101_1125 | DFW101_1303 | DFW101_1125 | DFW101_1303 | Ribonuclease, Rne/Rng family. | Single-stranded nucleic acid binding R3H domain-containing protein. | 0.926 |
| DFW101_1125 | DFW101_3347 | DFW101_1125 | DFW101_3347 | Ribonuclease, Rne/Rng family. | UPF0109 protein DFW101_3347; Belongs to the UPF0109 family. | 0.919 |
| DFW101_1125 | rho | DFW101_1125 | DFW101_1168 | Ribonuclease, Rne/Rng family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.641 |
| DFW101_1303 | DFW101_1125 | DFW101_1303 | DFW101_1125 | Single-stranded nucleic acid binding R3H domain-containing protein. | Ribonuclease, Rne/Rng family. | 0.926 |
| DFW101_1303 | DFW101_1305 | DFW101_1303 | DFW101_1305 | Single-stranded nucleic acid binding R3H domain-containing protein. | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.923 |
| DFW101_1303 | DFW101_3347 | DFW101_1303 | DFW101_3347 | Single-stranded nucleic acid binding R3H domain-containing protein. | UPF0109 protein DFW101_3347; Belongs to the UPF0109 family. | 0.979 |
| DFW101_1303 | rho | DFW101_1303 | DFW101_1168 | Single-stranded nucleic acid binding R3H domain-containing protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.820 |
| DFW101_1303 | rplB | DFW101_1303 | DFW101_3207 | Single-stranded nucleic acid binding R3H domain-containing protein. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.785 |
| DFW101_1303 | rplP | DFW101_1303 | DFW101_3211 | Single-stranded nucleic acid binding R3H domain-containing protein. | 50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.697 |
| DFW101_1303 | rplV | DFW101_1303 | DFW101_3209 | Single-stranded nucleic acid binding R3H domain-containing protein. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.695 |
| DFW101_1303 | rsmG | DFW101_1303 | DFW101_0877 | Single-stranded nucleic acid binding R3H domain-containing protein. | Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. | 0.754 |
| DFW101_1303 | trpA | DFW101_1303 | DFW101_2289 | Single-stranded nucleic acid binding R3H domain-containing protein. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.697 |
| DFW101_1303 | yidC | DFW101_1303 | DFW101_1304 | Single-stranded nucleic acid binding R3H domain-containing protein. | Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.947 |
| DFW101_1305 | DFW101_1303 | DFW101_1305 | DFW101_1303 | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Single-stranded nucleic acid binding R3H domain-containing protein. | 0.923 |
| DFW101_1305 | rho | DFW101_1305 | DFW101_1168 | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.845 |
| DFW101_1305 | rplB | DFW101_1305 | DFW101_3207 | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.784 |
| DFW101_1305 | rplV | DFW101_1305 | DFW101_3209 | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.467 |
| DFW101_1305 | yidC | DFW101_1305 | DFW101_1304 | Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins. | 0.974 |
| DFW101_3347 | DFW101_1125 | DFW101_3347 | DFW101_1125 | UPF0109 protein DFW101_3347; Belongs to the UPF0109 family. | Ribonuclease, Rne/Rng family. | 0.919 |
| DFW101_3347 | DFW101_1303 | DFW101_3347 | DFW101_1303 | UPF0109 protein DFW101_3347; Belongs to the UPF0109 family. | Single-stranded nucleic acid binding R3H domain-containing protein. | 0.979 |
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