STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1600HI0933 family protein. (386 aa)    
Predicted Functional Partners:
DFW101_1857
DNA photolyase FAD-binding.
   
    0.516
DFW101_2663
Geranylgeranyl reductase.
    
  0.512
DFW101_2338
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
    
  0.509
DFW101_0212
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.505
DFW101_0779
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.505
DFW101_1824
Surface antigen (D15).
  
    0.487
DFW101_1599
Multi-sensor hybrid histidine kinase.
  
  
 0.483
DFW101_1825
Uncharacterized protein.
  
    0.430
DFW101_2353
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
    0.418
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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