STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_1697Uncharacterized protein. (260 aa)    
Predicted Functional Partners:
DFW101_1728
Oxidoreductase domain protein.
  
 
 0.943
DFW101_1698
Cobalbumin biosynthesis protein.
 
     0.828
DFW101_1699
Phosphoesterase RecJ domain protein.
       0.805
DFW101_2317
Nucleoside 2-deoxyribosyltransferase.
  
 
 0.803
DFW101_0258
Adenosine kinase.
  
 
 0.800
DFW101_3065
Uncharacterized protein.
 
     0.764
DFW101_2392
Uncharacterized protein.
  
     0.753
DFW101_0532
DDE_Tnp_IS1595 domain-containing protein.
  
     0.739
DFW101_2053
Uncharacterized protein.
  
     0.736
DFW101_2217
Uncharacterized protein.
  
     0.731
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.