STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3104Transcriptional regulator, MarR family. (156 aa)    
Predicted Functional Partners:
DFW101_3103
Secretion protein HlyD family protein.
  
  
 0.800
DFW101_3269
Glycosyl transferase family 2.
  
 
 0.595
DFW101_2181
Glyoxalase/bleomycin resistance protein/dioxygenase.
    
 0.572
DFW101_3102
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
     
 0.569
DFW101_2643
Transaldolase.
 
  
  0.568
mqnB
Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).
 
  
  0.566
DFW101_1586
Uncharacterized protein.
    
 0.550
DFW101_3105
Natural resistance-associated macrophage protein.
     
 0.546
DFW101_2339
Acyl-CoA dehydrogenase domain-containing protein.
   
 
 0.545
DFW101_2704
Riboflavin synthase, alpha subunit.
  
 
 0.530
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.