STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3450Glutamate synthase (NADPH). (371 aa)    
Predicted Functional Partners:
DFW101_2406
Glutamate synthase (NADPH); Belongs to the glutamate synthase family.
 
 0.997
DFW101_2407
Glutamate synthase (NADPH).
 
0.997
DFW101_2405
Glutamine amidotransferase class-II.
  
 0.994
DFW101_3132
Ferredoxin-dependent glutamate synthase.
  
 0.988
DFW101_0009
Oxidoreductase FAD/NAD(P)-binding domain protein.
 0.984
DFW101_2601
NADH dehydrogenase (Quinone).
   
 0.958
DFW101_2337
Electron transfer flavoprotein alpha/beta-subunit.
   
 
 0.931
DFW101_3623
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain.
 
 0.925
DFW101_2631
Oxidoreductase FAD/NAD(P)-binding domain protein.
 
 0.921
DFW101_0694
Pyruvate:ferredoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 
 0.885
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.