STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DFW101_3451Iron-sulfur binding protein. (175 aa)    
Predicted Functional Partners:
DFW101_2600
Hydrogenase, Fe-only.
  
 0.988
DFW101_1625
NADH ubiquinone oxidoreductase 20 kDa subunit.
  
 0.983
DFW101_0694
Pyruvate:ferredoxin oxidoreductase; Belongs to the pyruvate:ferredoxin/flavodoxin oxidoreductase family.
  
 0.974
DFW101_2237
NADH-quinone oxidoreductase, B subunit; Belongs to the complex I 20 kDa subunit family.
  
 
 0.932
DFW101_2601
NADH dehydrogenase (Quinone).
  
 0.906
DFW101_2407
Glutamate synthase (NADPH).
   
 0.890
DFW101_2183
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
 
  
 0.879
DFW101_1867
Iron-sulfur binding protein.
 
  
 0.877
DFW101_1273
Molybdopterin oxidoreductase iron-sulfur cluster-binding subunit.
 
  
 0.876
DFW101_1498
Putative formate dehydrogenase, beta subunit.
 
  
 0.871
Your Current Organism:
Desulfovibrio carbinoliphilus
NCBI taxonomy Id: 694327
Other names: D. carbinoliphilus subsp. oakridgensis, Desulfovibrio carbinoliphilus subsp. oakridgensis, Desulfovibrio sp. FW-101-2B, personal::FW-101-2B
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