STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78345.1KEGG: gur:Gura_4003 hypothetical protein; SPTR: Putative uncharacterized protein. (177 aa)    
Predicted Functional Partners:
ADQ79976.1
Protein of unknown function DUF1211; COGs: COG3548 integral membrane protein; InterPro IPR010617; KEGG: pna:Pnap_1340 hypothetical protein; PFAM: protein of unknown function DUF1211; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1211).
  
     0.625
ADQ80898.1
SH3 type 3 domain protein; InterPro IPR003646: IPR013247; KEGG: rsc:RCFBP_11475 conserved exported protein of unknown function; PFAM: SH3 type 3 domain protein; SMART: SH3 domain protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3761); Bacterial SH3 domain.
  
     0.528
ADQ78346.1
Hypothetical protein.
       0.509
ADQ78344.1
Hypothetical protein.
       0.500
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.