STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ78987.1KEGG: bth:BT_1937 hypothetical protein; SPTR: Putative uncharacterized protein. (527 aa)    
Predicted Functional Partners:
ADQ78988.1
KEGG: bth:BT_1938 hypothetical protein; SPTR: Lipoprotein.
  
    0.807
ADQ78989.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: bth:BT_1939 putative outer membrane receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative outer membrane receptor; PFAM: TonB-dependent Receptor Plug Domain.
  
    0.807
ADQ78986.1
Peptidase M16 domain protein; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765: IPR007863; KEGG: gfo:GFO_0807 zinc protease PqqL; PFAM: peptidase M16 domain protein; SPTR: Zinc protease PqqL; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.774
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.