STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79096.1KEGG: pdi:BDI_2330 hypothetical protein; SPTR: Putative uncharacterized protein. (470 aa)    
Predicted Functional Partners:
ADQ79097.1
InterPro IPR006652; KEGG: sli:Slin_1887 kelch repeat-containing protein; PFAM: Kelch repeat type 1-containing protein; SPTR: Putative exported protein; PFAM: Kelch motif.
       0.523
ADQ79127.1
Soluble ligand binding domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715: IPR019554; KEGG: phe:Phep_3949 polysaccharide export protein; PFAM: Soluble ligand binding domain; polysaccharide export protein; SPTR: Putative capsule polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
     0.490
ADQ80082.1
Hypothetical protein; InterPro IPR008266; KEGG: pdi:BDI_2818 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Lipopolysaccharide kinase (Kdo/WaaP) family.
  
     0.489
ADQ78800.1
KEGG: pdi:BDI_0545 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.486
ADQ78595.1
Hypothetical protein; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: pdi:BDI_0921 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.473
ADQ78532.1
Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: bth:BT_1746 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.472
ADQ79442.1
Sporulation domain-containing protein; InterPro IPR007730; KEGG: bvu:BVU_3153 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; manually curated; PFAM: Sporulation related domain.
 
     0.462
ADQ79095.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: pdi:BDI_0423 putative nucleoside-diphosphate sugar epimerase/dehydrase; PFAM: polysaccharide biosynthesis protein CapD; SPTR: Capsular polysaccharide biosynthesis protein Cap5D; PFAM: Polysaccharide biosynthesis protein.
       0.431
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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