STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79398.1KEGG: bth:BT_0134 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3037). (127 aa)    
Predicted Functional Partners:
ADQ79399.1
KEGG: bth:BT_0135 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.952
ADQ79400.1
KEGG: sli:Slin_4541 transposase IS200-like protein; SPTR: Transposase IS200-like protein; PFAM: Transposase IS200 like.
       0.450
ADQ79397.1
KEGG: rbi:RB2501_05005 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.427
ADQ79601.1
KEGG: zpr:ZPR_0252 hypothetical protein; SPTR: Putative lipoprotein.
  
     0.413
ADQ80781.1
Protein of unknown function DUF490; InterPro IPR007844: IPR007452; KEGG: chu:CHU_1224 hypothetical protein; PFAM: protein of unknown function DUF490; AsmA family protein; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.409
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.