STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79971.1FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003439: IPR010230; KEGG: pdi:BDI_3537 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC. (253 aa)    
Predicted Functional Partners:
ADQ79970.1
Iron-regulated ABC transporter membrane component SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR010231; KEGG: bfs:BF0221 cysteine desulfurase activator complex subunit SufB; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly protein SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB.
 
 0.998
ADQ79972.1
FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825: IPR011542; KEGG: bth:BT_3408 ABC transporter permease; PFAM: SufBD protein; SPTR: Putative uncharacterized protein; TIGRFAM: FeS assembly protein SufD; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD, group 1.
 
 0.994
ADQ79394.1
Cysteine desulfurase, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR010970: IPR000192; KEGG: pdi:BDI_3543 aminotransferase; PFAM: aminotransferase class V; SPTR: Putative uncharacterized protein; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 0.980
ADQ79740.1
Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
  
 0.962
ADQ79419.1
Protein of unknown function DUF59; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: pdi:BDI_2590 hypothetical protein; PFAM: protein of unknown function DUF59; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein.
  
 0.939
ADQ78443.1
Hypothetical protein; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; KEGG: amu:Amuc_1902 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.818
ADQ79395.1
COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: pdi:BDI_3546 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: Putative uncharacterized protein; PFAM: Fe-S metabolism associated domain.
 
 
 0.712
ADQ79973.1
NUDIX hydrolase; InterPro IPR000086; KEGG: sli:Slin_1022 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: Hydrolase, NUDIX family protein; PFAM: NUDIX domain.
       0.492
ADQ79611.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
     
 0.440
ADQ79974.1
Ribosomal large subunit pseudouridine synthase F; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR006145: IPR000748: IPR018496; KEGG: aha:AHA_1628 23S rRNA pseudouridine synthase F; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.421
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.