STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79988.1Peptidase S9B dipeptidylpeptidase IV domain protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: bvu:BVU_1121 peptidase; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region. (747 aa)    
Predicted Functional Partners:
ADQ80402.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: sli:Slin_2637 major facilitator superfamily MFS_1; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily.
 
 
    0.814
ADQ79987.1
KEGG: phe:Phep_0401 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104).
     
 0.641
ADQ79986.1
KEGG: cpi:Cpin_1520 hypothetical protein; SPTR: Phenylalanine 4-monooxygenase; PFAM: GtrA-like protein.
       0.639
ADQ78235.1
Glycoside hydrolase family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: zpr:ZPR_0915 putative beta-xylosidase; PFAM: glycoside hydrolase family 43; SPTR: Putative beta-xylosidase; PFAM: Glycosyl hydrolases family 43.
  
     0.622
ADQ78828.1
KEGG: ote:Oter_3223 putative beta-xylosidase; SPTR: Putative beta-xylosidase.
  
     0.534
ADQ79989.1
KEGG: bfs:BF1100 putative ATP-binding protein; SPTR: Putative ATP-binding protein; manually curated.
 
     0.513
rsmA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.
       0.444
ADQ79990.1
KEGG: bfs:BF1101 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.443
ADQ79633.1
COGs: COG4299 conserved hypothetical protein; KEGG: cpi:Cpin_1463 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.