STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ79989.1KEGG: bfs:BF1100 putative ATP-binding protein; SPTR: Putative ATP-binding protein; manually curated. (421 aa)    
Predicted Functional Partners:
ADQ79990.1
KEGG: bfs:BF1101 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.796
ADQ78819.1
COGs: COG1112 Superfamily I DNA and RNA helicase and helicase subunits; KEGG: coc:Coch_0996 superfamily I DNA and RNA helicase and helicase subunits-like protein; SPTR: Superfamily I DNA and RNA helicase and helicase subunits-like protein.
  
    0.652
ADQ79988.1
Peptidase S9B dipeptidylpeptidase IV domain protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: bvu:BVU_1121 peptidase; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Peptidase; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
 
     0.513
ADQ81122.1
Protein of unknown function DUF955; COGs: COG2856 Zn peptidase; InterPro IPR001387: IPR010359; KEGG: cch:Cag_0309 hypothetical protein; PFAM: protein of unknown function DUF955; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF955).
 
     0.445
ADQ80095.1
COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR004546: IPR002296: IPR002052; KEGG: ttu:TERTU_2390 type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; SPTR: Type I restriction-modification system, M subunit; TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
  
    0.412
ADQ81088.1
Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR002052: IPR002296; KEGG: mma:MM_1669 type I restriction-modification system specificity subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
    0.412
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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