STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80107.1Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: bma:BMA1027 outer membrane protein, putative; PFAM: Tail Collar domain protein; SPTR: Putative uncharacterized protein; PFAM: Phage Tail Collar Domain. (898 aa)    
Predicted Functional Partners:
ADQ80265.1
Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: cpi:Cpin_5865 tail collar domain protein; PFAM: Tail Collar domain protein; SPTR: Tail Collar domain protein; PFAM: Phage Tail Collar Domain.
  
     0.775
ADQ80108.1
Hypothetical protein; KEGG: cpi:Cpin_3623 outer membrane adhesin like protein; SPTR: Outer membrane adhesin like protein.
       0.513
ADQ80106.1
KEGG: ssl:SS1G_10923 hypothetical protein; SPTR: Similar to Q8YRU7_ANASP All3346 protein.
       0.455
ADQ80105.1
KEGG: cpi:Cpin_6629 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.419
ADQ80807.1
KEGG: sli:Slin_5316 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.413
ADQ80264.1
KEGG: cpi:Cpin_5864 ABC-type branched-chain amino acid transport systems periplasmic component-like protein; SPTR: ABC-type branched-chain amino acid transport systems periplasmic component-like protein.
 
     0.411
ADQ80109.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_3624 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
       0.402
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.