STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80273.1COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006103: IPR006101; KEGG: pdi:BDI_3103 beta-glycosidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-galactosidase; SPTR: Putative uncharacterized protein; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain. (836 aa)    
Predicted Functional Partners:
ADQ79767.1
InterPro IPR002241: IPR013222; KEGG: ote:Oter_1363 hypothetical protein; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Putative uncharacterized protein; PFAM: NPCBM/NEW2 domain; Melibiase.
 
  
  0.929
ADQ79954.1
COGs: COG3345 Alpha-galactosidase; InterPro IPR002241: IPR000111; KEGG: rmr:Rmar_2597 alpha-galactosidase; PFAM: glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SPTR: Alpha-galactosidase; PFAM: Melibiase.
 
 
 0.921
ADQ79771.1
Alpha-galactosidase; InterPro IPR002241: IPR013222: IPR008009: IPR000111; KEGG: bth:BT_3592 alpha-galactosidase precursor; PFAM: Glycosyl hydrolase family 98 putative carbohydrate binding module; Ig family protein; glycoside hydrolase clan GH-D; PRIAM: Alpha-galactosidase; SMART: Glycosyl hydrolase family 98 putative carbohydrate binding module; SPTR: Alpha-galactosidase; PFAM: NPCBM/NEW2 domain; Melibiase; Putative Ig domain.
 
  
  0.920
ADQ78337.1
Glucokinase; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: bfs:BF0512 ROK family transcriptional repressor; PFAM: ROK family protein; SPTR: Putative uncharacterized protein; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
    
 0.907
ADQ78399.1
Glucosylceramidase; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR001139; KEGG: cpi:Cpin_6735 glycoside hydrolase family 30; PFAM: glycoside hydrolase family 30; PRIAM: Glucosylceramidase; SPTR: Glycoside hydrolase family 30; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.902
ADQ78400.1
Glucan endo-1,6-beta-glucosidase; COGs: COG5520 O-Glycosyl hydrolase; InterPro IPR001139; KEGG: cpi:Cpin_6736 glycoside hydrolase family 30; PFAM: glycoside hydrolase family 30; PRIAM: Glucan endo-1,6-beta-glucosidase; SPTR: Glycoside hydrolase family 30; PFAM: O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
 
  0.902
ADQ78231.1
Glycoside hydrolase family 35; COGs: COG1874 Beta-galactosidase; InterPro IPR000421: IPR001944; KEGG: bth:BT_3654 beta-galactosidase precursor; PFAM: glycoside hydrolase family 35; coagulation factor 5/8 type domain protein; SPTR: Glycosyl hydrolase family 35; PFAM: F5/8 type C domain; Glycosyl hydrolases family 35.
 
 0.824
xylA
COGs: COG2115 Xylose isomerase; InterPro IPR001998: IPR012307: IPR013452; KEGG: bth:BT_0793 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family.
    
 0.809
ADQ80274.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
  
 
 0.797
ADQ79774.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterProIPR006101: IPR006104: IPR006102: IPR006103: IPR 004199; KEGG: cpi:Cpin_2720 glycoside hydrolase family 2 TIM barrel; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 42 domain 5 loop region; SPTR: Glycoside hydrolase family 2 TIM barrel; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar [...]
  
  
 
0.754
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.