STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80358.1COGs: COG3608 deacylase; InterPro IPR007036; KEGG: cbe:Cbei_4346 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase family protein; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family. (314 aa)    
Predicted Functional Partners:
ADQ80357.1
COGs: COG1305 Transglutaminase-like protein; InterPro IPR013589: IPR002931; KEGG: blj:BLD_1738 transglutaminase-like cysteine protease; PFAM: transglutaminase domain-containing protein; transglutaminase domain protein; SMART: transglutaminase domain-containing protein; SPTR: Transglutaminase domain protein; PFAM: Bacterial transglutaminase-like N-terminal region; Transglutaminase-like superfamily.
 
     0.883
ADQ80359.1
COGs: COG3608 deacylase; InterPro IPR007036; KEGG: cbe:Cbei_4345 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase family protein; PFAM: Succinylglutamate desuccinylase / Aspartoacylase family.
 
    
0.838
ADQ80356.1
KEGG: shi:Shel_22860 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Bacterial domain of unknown function (DUF403).
       0.772
ADQ80355.1
Protein of unknown function DUF404; COGs: COG2308 conserved hypothetical protein; InterPro IPR007297: IPR007302: IPR016450; KEGG: shi:Shel_22870 hypothetical protein; PFAM: protein of unknown function DUF404; protein of unknown function DUF407; SPTR: UDP-N-acetylmuramate dehydrogenase; PFAM: Domain of unknown function (DUF407); Domain of unknown function (DUF404).
 
     0.758
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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