STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80421.1KEGG: dfe:Dfer_4533 hypothetical protein; SPTR: Putative uncharacterized protein. (375 aa)    
Predicted Functional Partners:
ADQ80420.1
L-fucose transporter; COGs: COG0738 Fucose permease; InterPro IPR011701: IPR005275; KEGG: pdi:BDI_0104 fucose permease; PFAM: major facilitator superfamily MFS_1; SPTR: L-fucose:H+ symporter permease; TIGRFAM: L-fucose transporter; PFAM: Major Facilitator Superfamily; TIGRFAM: L-fucose:H+ symporter permease.
 
     0.792
ADQ80419.1
COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933: IPR016286; KEGG: cak:Caul_1541 alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); PRIAM: Alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase); SPTR: Alpha-L-fucosidase; PFAM: Alpha-L-fucosidase.
 
     0.663
ADQ80418.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395: IPR020471: IPR018170; KEGG: sus:Acid_2860 aldehyde reductase; PFAM: aldo/keto reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
       0.516
ADQ80422.1
COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterProIPR013027: IPR004099: IPR000815: IPR006258: IPR 012999; KEGG: pdi:BDI_3052 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; manually curated; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimeri [...]
       0.448
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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