STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80834.1KEGG: tet:TTHERM_00318640 hypothetical protein; SPTR: Putative uncharacterized protein. (126 aa)    
Predicted Functional Partners:
ADQ80833.1
SpoIID/LytB domain protein; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013693: IPR013486; KEGG: bth:BT_3621 amidase enhancer precursor; PFAM: Stage II sporulation protein D; SPTR: Amidase enhancer; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain.
       0.773
ADQ80832.1
leucyl-tRNA synthetase; COGs: COG2852 conserved hypothetical protein; KEGG: coc:Coch_0952 leucyl-tRNA synthetase; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF559).
       0.470
ADQ80831.1
Major facilitator superfamily MFS_1; InterPro IPR011701; KEGG: bvu:BVU_2595 beta-lactamase induction signal transducer; PFAM: major facilitator superfamily MFS_1; SPTR: Putative uncharacterized protein; PFAM: BT1 family.
       0.441
ADQ80835.1
KEGG: bfr:BF0433 putative glycosyltransferase; SPTR: Glycoside transferase family 2 protein.
       0.401
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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