STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ80910.1COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: bth:BT_0353 L-ribulose-5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; SPTR: Putative uncharacterized protein; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase. (227 aa)    
Predicted Functional Partners:
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 0.994
ADQ80907.1
L-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR018484: IPR018485: IPR005929; KEGG: sli:Slin_1239 L-ribulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Ribulokinase; TIGRFAM: L-ribulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; Belongs to the ribulokinase family.
 
 
 0.992
ADQ78852.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018126: IPR018484: IPR018485; KEGG: bth:BT_0792 xylulose kinase (xylulokinase); PFAM: Carbohydrate kinase, FGGY-like; SPTR: Putative uncharacterized protein; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
 
 0.963
ADQ80877.1
COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: coc:Coch_0333 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase.
    
 0.925
uxaC
COGs: COG1904 Glucuronate isomerase; InterPro IPR003766; KEGG: bth:BT_0823 glucuronate isomerase; PFAM: Glucuronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Uronate isomerase; PFAM: Glucuronate isomerase.
     
 0.831
ADQ80418.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395: IPR020471: IPR018170; KEGG: sus:Acid_2860 aldehyde reductase; PFAM: aldo/keto reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
    
 0.807
ADQ80740.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395: IPR020471: IPR018170; KEGG: abo:ABO_2414 aldehyde reductase; PFAM: aldo/keto reductase; PRIAM: Aldehyde reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
    
 0.807
ADQ79768.1
Beta-glucuronidase; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006101: IPR006104: IPR006102: IPR006103; KEGG: fjo:Fjoh_2082 beta-glucuronidase; PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; PRIAM: Beta-glucuronidase; SPTR: Beta-glucuronidase (GusB); PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain.
   
 
 0.805
ADQ80909.1
alpha-L-arabinofuranosidase domain protein; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: bth:BT_0348 alpha-L-arabinofuranosidase; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein; SPTR: Alpha-L-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase C-terminus.
 
  
 0.746
ADQ80911.1
NUDIX hydrolase; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: pdi:BDI_1667 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain.
  
    0.666
Your Current Organism:
Paludibacter propionicigenes
NCBI taxonomy Id: 694427
Other names: P. propionicigenes WB4, Paludibacter propionicigenes CCUG 53888, Paludibacter propionicigenes DSM 17365, Paludibacter propionicigenes JCM 13257, Paludibacter propionicigenes WB4, Paludibacter propionicigenes str. WB4, Paludibacter propionicigenes strain WB4
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