STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B7QA74_IXOSCHigh mobility group protein, putative (Fragment). (740 aa)    
Predicted Functional Partners:
B7P2L8_IXOSC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.801
B7P104_IXOSC
Transcription initiation factor ia, putative (Fragment).
    
 0.791
B7Q4R8_IXOSC
General transcription factor IIE (TFIIE) subunit, putative.
    
 0.753
B7PU71_IXOSC
RNA polymerase II transcription initiation factor, putative (Fragment).
    
 0.743
B7PSA7_IXOSC
TATA-box binding protein (TBP), component of TFII-D and TFIIIB, putative (Fragment).
   
 0.738
B7QGL8_IXOSC
Rad25/xp-B DNA repair helicase, putative.
   
 0.737
B7QFH0_IXOSC
Uncharacterized protein.
    
 0.730
B7PEW4_IXOSC
Histone H2A; Belongs to the histone H2A family.
   
 0.724
B7PCD8_IXOSC
Bcl-2-associated transcription factor (BTF), putative.
    
 0.716
B7PB82_IXOSC
Cdk activating kinase, putative; Belongs to the cyclin family.
    
 0.698
Your Current Organism:
Ixodes scapularis
NCBI taxonomy Id: 6945
Other names: I. scapularis, Ixodes dammini, Ixodes sp. DNAS-303-249710, black-legged tick, blacklegged tick, deer tick, shoulder tick
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