STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VP1G_03263Uncharacterized protein. (308 aa)    
Predicted Functional Partners:
VP1G_01839
Ubiquitin-conjugating enzyme E2 14.
    
 0.734
VP1G_00947
HECT domain-containing protein.
     
 0.730
VP1G_08275
Rap-GAP domain-containing protein.
    
 0.712
VP1G_09747
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.702
VP1G_02167
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
    
 0.685
VP1G_06627
Baculoviral IAP repeat-containing protein 5.1.
   
 0.681
VP1G_00333
Ubiquitin-60S ribosomal protein L40.
    
 0.674
VP1G_00847
Polyubiquitin.
    
 0.674
VP1G_10673
Uncharacterized protein.
    
 0.674
VP1G_10316
Ubiquitin-like domain-containing protein.
    
 0.674
Your Current Organism:
Valsa mali
NCBI taxonomy Id: 694573
Other names: V. mali var. pyri, Valsa mali var. pyri, Valsa sp. DD-2016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.