Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM3 | A0A194VEF2 | A0A194VG93 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.997 |
| LSM1 | VP1G_01159 | A0A194VEF2 | A0A194UQB4 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | PAT1 domain-containing protein. | 0.995 |
| LSM1 | VP1G_01675 | A0A194VEF2 | A0A194URA0 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.617 |
| LSM1 | VP1G_04098 | A0A194VEF2 | A0A194UYW7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.971 |
| LSM1 | VP1G_07737 | A0A194VEF2 | A0A194V9N9 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | mRNA decapping complex subunit 2. | 0.943 |
| LSM1 | VP1G_09918 | A0A194VEF2 | A0A194VG97 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | mRNA-decapping enzyme 1B. | 0.816 |
| LSM3 | LSM1 | A0A194VG93 | A0A194VEF2 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.997 |
| LSM3 | VP1G_01159 | A0A194VG93 | A0A194UQB4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | PAT1 domain-containing protein. | 0.999 |
| LSM3 | VP1G_04098 | A0A194VG93 | A0A194UYW7 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.971 |
| LSM3 | VP1G_05028 | A0A194VG93 | A0A194V169 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.975 |
| LSM3 | VP1G_07737 | A0A194VG93 | A0A194V9N9 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | mRNA decapping complex subunit 2. | 0.871 |
| LSM3 | VP1G_09918 | A0A194VG93 | A0A194VG97 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | mRNA-decapping enzyme 1B. | 0.834 |
| VP1G_01159 | LSM1 | A0A194UQB4 | A0A194VEF2 | PAT1 domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.995 |
| VP1G_01159 | LSM3 | A0A194UQB4 | A0A194VG93 | PAT1 domain-containing protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| VP1G_01159 | VP1G_04098 | A0A194UQB4 | A0A194UYW7 | PAT1 domain-containing protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.970 |
| VP1G_01159 | VP1G_05028 | A0A194UQB4 | A0A194V169 | PAT1 domain-containing protein. | Uncharacterized protein. | 0.969 |
| VP1G_01159 | VP1G_07737 | A0A194UQB4 | A0A194V9N9 | PAT1 domain-containing protein. | mRNA decapping complex subunit 2. | 0.997 |
| VP1G_01159 | VP1G_09918 | A0A194UQB4 | A0A194VG97 | PAT1 domain-containing protein. | mRNA-decapping enzyme 1B. | 0.981 |
| VP1G_01675 | LSM1 | A0A194URA0 | A0A194VEF2 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.617 |
| VP1G_01675 | VP1G_02856 | A0A194URA0 | A0A194UUM9 | Uncharacterized protein. | Guanine nucleotide-binding protein subunit beta-like protein. | 0.906 |
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