STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BARCL_0069Bartonella effector protein (Bep); Function of homologous gene experimentally demonstrated in an other organism; factor. (558 aa)    
Predicted Functional Partners:
BARCL_0634
Homologs of previously reported genes of unknown function.
    
   0.871
BARCL_0638
Homologs of previously reported genes of unknown function.
    
   0.871
BARCL_1202
Homologs of previously reported genes of unknown function.
  
     0.743
BARCL_1020
Homologs of previously reported genes of unknown function.
  
     0.742
BARCL_0475
Putative autotransporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.733
BARCL_0476
Homologs of previously reported genes of unknown function.
  
     0.730
BARCL_0145
Homologs of previously reported genes of unknown function.
  
     0.725
BARCL_0565
Fragment of Bartonella effector protein (Bep); Gene remnant; factor.
  
     0.717
BARCL_1178
Phage-related protein.
  
     0.714
BARCL_0567
Homologs of previously reported genes of unknown function.
  
     0.712
Your Current Organism:
Bartonella clarridgeiae
NCBI taxonomy Id: 696125
Other names: B. clarridgeiae 73, Bartonella clarridgeiae 73, Bartonella clarridgeiae str. 73, Bartonella clarridgeiae strain 73
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