STRINGSTRING
tolC protein (Midichloria mitochondrii) - STRING interaction network
"tolC" - Type I secretion outer membrane protein in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolCType I secretion outer membrane protein (425 aa)    
Predicted Functional Partners:
midi_00321
RND family efflux transporter MFP subunit (318 aa)
   
 
  0.816
lolD
Lipoprotein-releasing system ATP-binding protein lolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (196 aa)
   
 
  0.810
midi_00600
HlyD family secretion protein (492 aa)
 
   
  0.709
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (881 aa)
     
      0.673
midi_00051
Hypothetical protein (46 aa)
              0.664
midi_00049
Hypothetical protein (43 aa)
              0.537
midi_00048
Putative transposase (184 aa)
              0.537
midi_00416
Toluene tolerance transporter (194 aa)
   
        0.516
phoB
Phosphate regulon transcriptional regulatory protein PhoB (243 aa)
   
 
  0.506
ompR
Two component transcriptional regulator, winged helix family (166 aa)
   
 
  0.506
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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