STRINGSTRING
midi_00303 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00303" - Hypothetical protein in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00303Hypothetical protein (187 aa)    
Predicted Functional Partners:
rpmE
Ribosomal protein L31 (108 aa)
 
          0.798
midi_00912
Hypothetical protein (183 aa)
   
          0.777
midi_01255
Hypothetical protein (182 aa)
   
          0.760
midi_01048
Transcriptional regulator XRE family (161 aa)
   
          0.729
midi_00368
Hypothetical protein (215 aa)
   
          0.727
midi_00322
Hypothetical protein (673 aa)
   
          0.716
rpmI
Ribosomal protein L35 (66 aa)
 
          0.695
recO
DNA repair protein RecO (243 aa)
   
          0.693
midi_00302
Hypothetical protein (243 aa)
              0.644
rnd
Ribonuclease D (204 aa)
   
          0.593
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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