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rsmE protein (Midichloria mitochondrii) - STRING interaction network
"rsmE" - 16S ribosomal RNA methyltransferase RsmE in Midichloria mitochondrii
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rsmE16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (238 aa)    
Predicted Functional Partners:
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (316 aa)
   
        0.870
midi_00352
Putative phosphatidic acid phosphatase PAP2 superfamily protein (234 aa)
              0.861
gst
Glutathione S-transferase (229 aa)
              0.859
rpsT
Ribosomal protein S20p; Binds directly to 16S ribosomal RNA (91 aa)
              0.837
gshA
Glutamate--cysteine ligase GshA (395 aa)
              0.703
midi_00283
Cysteine desulfurase 2 (520 aa)
              0.576
midi_00204
Hypothetical protein (216 aa)
   
 
  0.564
midi_00799
Putative methyltransferase (222 aa)
   
   
  0.534
tsaD
Putative DNA-binding/iron metalloprotein/AP endonuclease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction (323 aa)
   
        0.510
midi_00267
MiaB-like tRNA modifying enzyme (416 aa)
   
        0.498
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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