STRINGSTRING
midi_00383 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00383" - Surface antigen in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00383Surface antigen (164 aa)    
Predicted Functional Partners:
fabI
Enoyl-(acyl-carrier-protein) reductase (263 aa)
              0.801
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) (233 aa)
              0.606
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (240 aa)
              0.577
midi_00385
protein-L-isoaspartate carboxylmethyltransferase (215 aa)
              0.577
holA
DNA polymerase III subunit delta (349 aa)
   
          0.542
midi_00387
Hypothetical protein (212 aa)
              0.536
hlpA
ompH family outer membrane protein (188 aa)
   
          0.534
midi_00522
Hypothetical protein (308 aa)
   
          0.470
midi_00381
Hypothetical protein (182 aa)
              0.464
midi_00414
TPR domain-containing protein (348 aa)
   
          0.409
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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