STRINGSTRING
pheS protein (Midichloria mitochondrii) - STRING interaction network
"pheS" - phenylalanyl-tRNA synthetase subunit alpha in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheSphenylalanyl-tRNA synthetase subunit alpha (341 aa)    
Predicted Functional Partners:
pheT
phenylalanyl-tRNA synthetase subunit beta (792 aa)
 
  0.999
thrS
threonyl-tRNA synthetase (641 aa)
   
 
  0.931
valS
valyl-tRNA synthetase (304 aa)
   
   
  0.874
midi_00428
Hypothetical protein (54 aa)
              0.859
hisS
histidyl-tRNA synthetase (417 aa)
   
   
  0.852
metG
methionyl-tRNA synthetase (493 aa)
   
   
  0.836
lepA
GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner (557 aa)
   
   
  0.829
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (411 aa)
   
 
  0.826
leuS
leucyl-tRNA synthetase (839 aa)
   
   
  0.821
proS
prolyl-tRNA synthetase (405 aa)
   
   
  0.814
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
Server load: low (13%) [HD]