STRINGSTRING
midi_00586 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00586" - Hypothetical protein in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00586Hypothetical protein (393 aa)    
Predicted Functional Partners:
sdaC
Amino acid permease (404 aa)
 
          0.760
cmK
Cytidylate kinase (208 aa)
              0.579
pcca-1
propionyl-CoA carboxylase subunit alpha (668 aa)
              0.576
midi_00318
Amino acid transporter (482 aa)
   
 
  0.532
rpsA
30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (567 aa)
   
        0.492
midi_00535
Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (155 aa)
   
        0.484
uvrA
Excinuclease ABC subunit A (522 aa)
         
  0.483
polA
DNA polymerase I (847 aa)
 
   
  0.461
midi_00414
TPR domain-containing protein (348 aa)
   
          0.459
midi_00588
Hypothetical protein (53 aa)
              0.429
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
Server load: low (10%) [HD]