STRINGSTRING
sdaC protein (Midichloria mitochondrii) - STRING interaction network
"sdaC" - Amino acid permease in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sdaCAmino acid permease (404 aa)    
Predicted Functional Partners:
dnaK
Molecular chaperone DnaK; Acts as a chaperone (631 aa)
       
    0.770
hscA
Chaperone protein, HscA (499 aa)
       
    0.770
midi_00586
Hypothetical protein (393 aa)
 
          0.760
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (470 aa)
   
          0.620
midi_00338
Nucleotide transport protein (473 aa)
   
          0.546
sucD
succinyl-CoA synthetase subunit alpha (259 aa)
     
        0.518
midi_00588
Hypothetical protein (53 aa)
              0.517
pcca-1
propionyl-CoA carboxylase subunit alpha (668 aa)
   
        0.479
cmK
Cytidylate kinase (208 aa)
              0.474
midi_00183
ATP/ADP translocase class 1 (497 aa)
   
          0.457
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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