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surA protein (Midichloria mitochondrii) - STRING interaction network
"surA" - PpiC-type peptidyl-prolyl cis-trans isomerase in Midichloria mitochondrii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
surAPpiC-type peptidyl-prolyl cis-trans isomerase (256 aa)    
Predicted Functional Partners:
midi_01177
PQQ enzyme repeat family protein (412 aa)
   
 
  0.766
midi_00176
Surface antigen (608 aa)
 
 
  0.746
midi_00177
Hypothetical protein (129 aa)
   
 
  0.673
midi_00876
Histidine triad (HIT) family protein (124 aa)
   
 
  0.668
midi_00591
Hypothetical protein (64 aa)
              0.663
midi_00317
Putative transcription-repair coupling factor (308 aa)
 
     
  0.590
rpoC
DNA-directed RNA polymerase subunit beta’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (730 aa)
     
 
  0.569
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (185 aa)
   
      0.548
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (144 aa)
   
 
  0.523
midi_00592
Putative organic solvent tolerance protein (496 aa)
   
   
  0.517
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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