STRINGSTRING
leuB protein (Midichloria mitochondrii) - STRING interaction network
"leuB" - Isocitrate dehydrogenase in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuBIsocitrate dehydrogenase (478 aa)    
Predicted Functional Partners:
sucA
Alpha-ketoglutarate dehydrogenase (936 aa)
   
  0.980
acnA
Aconitate hydratase; Catalyzes the isomerization of citrate to isocitrate via cis-aconitate (890 aa)
   
  0.980
midi_00692
Dihydrolipoamide dehydrogenase (433 aa)
   
  0.973
midi_00078
Dihydrolipoamide dehydrogenase (464 aa)
   
  0.973
midi_00149
Putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase (1084 aa)
     
 
  0.919
atpD
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits (470 aa)
   
 
  0.917
gltA
Citrate synthase I (438 aa)
   
 
  0.874
aspB
Aspartate/tyrosine/aromatic aminotransferase (401 aa)
   
  0.837
midi_00639
NAD-glutamate dehydrogenase (1582 aa)
       
    0.807
sucC
succinyl-CoA synthetase subunit beta (388 aa)
   
 
  0.798
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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