STRINGSTRING
pccB protein (Midichloria mitochondrii) - STRING interaction network
"pccB" - propionyl-CoA carboxylase subunit beta in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pccBpropionyl-CoA carboxylase subunit beta (511 aa)    
Predicted Functional Partners:
pcca-1
propionyl-CoA carboxylase subunit alpha (668 aa)
 
  0.999
birA
Biotin-protein ligase (239 aa)
   
  0.987
gutQ
D-arabinose 5-phosphate (317 aa)
   
  0.967
midi_01200
Putative ABC transporter ATP-binding protein (818 aa)
   
 
  0.864
fabB
3-oxoacyl-[acyl carrier protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (408 aa)
   
 
  0.809
acpS
4’-phosphopantetheinyl transferase; Transfers the 4’-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein (123 aa)
   
 
  0.748
midi_00256
ABC transporter (460 aa)
     
        0.528
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions (385 aa)
     
      0.517
midi_00724
Ankyrin repeat-containing protein (276 aa)
   
      0.514
gltA
Citrate synthase I (438 aa)
   
 
  0.510
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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