STRINGSTRING
soj protein (Midichloria mitochondrii) - STRING interaction network
"soj" - Chromosome partitioning protein in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sojChromosome partitioning protein (271 aa)    
Predicted Functional Partners:
hisS
histidyl-tRNA synthetase (417 aa)
              0.860
midi_00237
parB-like partition protein (312 aa)
   
 
  0.632
dnaA
Chromosomal replication initiation protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (476 aa)
     
 
  0.616
midi_00898
Chromosomal replication initiator proteinDnaA like protein (220 aa)
     
 
  0.613
midi_00238
Putative ATPase involved in cell division (460 aa)
 
   
  0.595
midi_00768
Hypothetical protein (93 aa)
              0.587
polA
DNA polymerase I (847 aa)
   
   
  0.564
pgi
Glucose-6-phosphate isomerase (330 aa)
         
  0.529
birA
Biotin-protein ligase (239 aa)
   
   
  0.495
xerD
Tyrosine recombinase XerD (310 aa)
   
   
  0.490
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
Server load: low (8%) [HD]