STRINGSTRING
midi_00788 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00788" - Putative type IV secretion system protein in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00788Putative type IV secretion system protein (852 aa)    
Predicted Functional Partners:
midi_00700
Putative type IV secretion system protein (699 aa)
 
   
0.937
virB8
Type IV secretion system protein VirB8 (235 aa)
 
     
  0.871
midi_00789
Hypothetical protein (176 aa)
              0.859
midi_00701
Type IV secretion system protein (469 aa)
   
   
 
0.839
midi_01214
Hypothetical protein (92 aa)
   
          0.778
midi_00576
Intradiol ring-cleavage dioxygenase (209 aa)
 
          0.757
midi_00414
TPR domain-containing protein (348 aa)
   
          0.724
midi_00899
Putative permease (280 aa)
   
          0.661
midi_00895
Putative type IV secretion system protein (259 aa)
 
     
  0.592
midi_01234
cvpA family protein (273 aa)
   
          0.573
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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