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aspB protein (Midichloria mitochondrii) - STRING interaction network
"aspB" - Aspartate/tyrosine/aromatic aminotransferase in Midichloria mitochondrii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspBAspartate/tyrosine/aromatic aminotransferase (401 aa)    
Predicted Functional Partners:
mdh
Malate/lactate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate (317 aa)
   
 
  0.920
midi_00639
NAD-glutamate dehydrogenase (1582 aa)
     
 
  0.907
midi_00062
Bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (191 aa)
         
    0.900
gltA
Citrate synthase I (438 aa)
   
 
  0.853
lysC
Aspartokinase (398 aa)
   
  0.849
midi_00489
Aspartate kinase (374 aa)
   
  0.849
leuB
Isocitrate dehydrogenase (478 aa)
   
  0.837
sdhB
Succinate dehydrogenase/fumarate reductase (258 aa)
   
    0.831
sdhA
Succinate dehydrogenase flavoprotein subunit (597 aa)
     
 
  0.826
pepA
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (495 aa)
       
  0.819
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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