STRINGSTRING
midi_00895 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00895" - Putative type IV secretion system protein in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00895Putative type IV secretion system protein (259 aa)    
Predicted Functional Partners:
virD4
Type IV secretion system protein VirD4 (461 aa)
     
  0.969
virB10
Type IV secretion system protein VirB10 (492 aa)
 
     
  0.946
virB8
Type IV secretion system protein VirB8 (235 aa)
 
     
  0.940
midi_00896
Putative type IV secretion system protein (236 aa)
         
  0.925
virB4
Type IV secretion system protein VirB4 (748 aa)
     
  0.885
virB11
Type IV secretion system protein VirB11 (327 aa)
     
  0.787
midi_00701
Type IV secretion system protein (469 aa)
 
     
  0.681
midi_00700
Putative type IV secretion system protein (699 aa)
 
     
  0.594
midi_00788
Putative type IV secretion system protein (852 aa)
 
     
  0.592
midi_00898
Chromosomal replication initiator proteinDnaA like protein (220 aa)
         
  0.585
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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