STRINGSTRING
midi_00896 protein (Midichloria mitochondrii) - STRING interaction network
"midi_00896" - Putative type IV secretion system protein in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
midi_00896Putative type IV secretion system protein (236 aa)    
Predicted Functional Partners:
midi_00895
Putative type IV secretion system protein (259 aa)
         
  0.925
virB8
Type IV secretion system protein VirB8 (235 aa)
         
    0.800
midi_00898
Chromosomal replication initiator proteinDnaA like protein (220 aa)
              0.579
midi_00897
Hypothetical protein (354 aa)
              0.579
virD4
Type IV secretion system protein VirD4 (461 aa)
         
  0.505
virB4
Type IV secretion system protein VirB4 (748 aa)
         
  0.505
midi_00788
Putative type IV secretion system protein (852 aa)
         
  0.505
midi_00701
Type IV secretion system protein (469 aa)
         
  0.505
midi_00700
Putative type IV secretion system protein (699 aa)
         
  0.505
virB9
Type IV secretion system protein VirB9 (237 aa)
         
  0.501
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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