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mrcB protein (Midichloria mitochondrii) - STRING interaction network
"mrcB" - Membrane carboxypeptidase in Midichloria mitochondrii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrcBMembrane carboxypeptidase (616 aa)    
Predicted Functional Partners:
ftsI
Peptidoglycan synthetase FtsI (570 aa)
 
 
  0.972
midi_00438
Peptidoglycan glycosyltransferase (606 aa)
 
 
  0.970
murG
N-acetylglucosaminyl transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) (366 aa)
   
 
  0.929
midi_00838
D-alanyl-D-alanine carboxypeptidase (388 aa)
       
  0.916
midi_00012
D-alanyl-D-alanine carboxypeptidase (285 aa)
       
  0.916
dacB
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (470 aa)
   
 
  0.909
ftsW
Cell division protein (395 aa)
   
 
  0.862
nuoF
NADH dehydrogenase I subunit F (434 aa)
              0.856
midi_00369
Membrane-bound lytic murein transglycosylase A (364 aa)
       
 
  0.848
uvrA
Excinuclease ABC subunit A (522 aa)
   
 
  0.842
Your Current Organism:
Midichloria mitochondrii
NCBI taxonomy Id: 696127
Other names: C. Midichloria, C. Midichloria mitochondrii, C. Midichloria mitochondrii IricVA, Candidatus Midichloria, Candidatus Midichloria mitochondrii, Candidatus Midichloria mitochondrii IricVA, Candidatus Midichloria mitochondrii str. IricVA, Candidatus Midichloria mitochondrii strain IricVA, Ixodes ricinus endosymbiont, Ixodes ricinus endosymbiont 1 (IricES1), Midichloria, Midichloria mitochondrii, Midichloria mitochondrii IricVA, endosymbiont of Ixodes ricinus
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