STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI93499.1Thermostable monoacylglycerol lipase. (328 aa)    
Predicted Functional Partners:
metX
Homoserine O-acetyltransferase.
     
 0.830
OJI93501.1
Hypothetical protein.
       0.767
OJI93500.1
Glyoxalase-like domain protein.
       0.756
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
  
    0.651
kduD_1
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
       0.585
OJI93497.1
Hypothetical protein.
       0.574
ihfA_2
Integration host factor subunit alpha.
  
     0.555
bioH
Pimeloyl-[acyl-carrier protein] methyl ester esterase.
     
 0.478
OJI93333.1
Hypothetical protein.
  
     0.437
OJI93504.1
Hypothetical protein.
  
    0.429
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.