STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJI92657.1Hypothetical protein. (435 aa)    
Predicted Functional Partners:
rsbW
Serine-protein kinase RsbW.
   
  
 0.866
OJI91707.1
Hypothetical protein.
   
    0.821
OJI93130.1
TadE-like protein.
 
    0.763
OJI93129.1
Hypothetical protein.
 
    0.725
flgG
Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family.
   
   0.703
OJI94798.1
Hypothetical protein.
  
     0.686
recQ_2
ATP-dependent DNA helicase RecQ.
       0.655
OJI95241.1
Heme NO binding protein.
  
    0.639
OJI92659.1
Calcineurin-like phosphoesterase.
       0.638
OJI92858.1
Sporulation related domain protein.
  
     0.608
Your Current Organism:
Planktotalea frisia
NCBI taxonomy Id: 696762
Other names: DSM 23709, LMG 25294, LMG:25294, P. frisia, Planktotalea frisia Hahnke et al. 2012, Rhodobacteraceae bacterium SH6-1, strain SH6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.