Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rplD | rplM | Mahau_2155 | Mahau_1894 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
| rplD | rplS | Mahau_2155 | Mahau_1061 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.995 |
| rplD | rplT | Mahau_2155 | Mahau_0612 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.995 |
| rplD | rplU | Mahau_2155 | Mahau_1513 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplD | rpmA | Mahau_2155 | Mahau_1511 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: cpy:Cphy_2549 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: LSU ribosomal protein L27P; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.988 |
| rplD | rpmB | Mahau_2155 | Mahau_0994 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: cbf:CLI_2559 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.975 |
| rplD | rpmF | Mahau_2155 | Mahau_1697 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: afn:Acfer_1398 ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: Ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.971 |
| rplD | rpsI | Mahau_2155 | Mahau_1893 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | COGs: COG0103 Ribosomal protein S9; InterPro IPR000754: IPR020574; KEGG: tte:TTE2256 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.995 |
| rplD | rpsP | Mahau_2155 | Mahau_1057 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | COGs: COG0228 Ribosomal protein S16; InterPro IPR000307: IPR020592; KEGG: bbe:BBR47_36170 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.991 |
| rplD | rpsT | Mahau_2155 | Mahau_1666 | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.954 |
| rplM | rplD | Mahau_1894 | Mahau_2155 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L4P; Forms part of the polypeptide exit tunnel. | 0.997 |
| rplM | rplS | Mahau_1894 | Mahau_1061 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.996 |
| rplM | rplT | Mahau_1894 | Mahau_0612 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.998 |
| rplM | rplU | Mahau_1894 | Mahau_1513 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.994 |
| rplM | rpmA | Mahau_1894 | Mahau_1511 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | COGs: COG0211 Ribosomal protein L27; InterPro IPR001684: IPR018261; KEGG: cpy:Cphy_2549 50S ribosomal protein L27; PFAM: ribosomal protein L27; SPTR: LSU ribosomal protein L27P; TIGRFAM: ribosomal protein L27; PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.996 |
| rplM | rpmB | Mahau_1894 | Mahau_0994 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | COGs: COG0227 Ribosomal protein L28; InterPro IPR001383; KEGG: cbf:CLI_2559 50S ribosomal protein L28; PFAM: ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family. | 0.992 |
| rplM | rpmF | Mahau_1894 | Mahau_1697 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | COGs: COG0333 Ribosomal protein L32; InterPro IPR002677; KEGG: afn:Acfer_1398 ribosomal protein L32; PFAM: ribosomal L32p protein; SPTR: Ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.991 |
| rplM | rpsI | Mahau_1894 | Mahau_1893 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | COGs: COG0103 Ribosomal protein S9; InterPro IPR000754: IPR020574; KEGG: tte:TTE2256 ribosomal protein S9; PFAM: ribosomal protein S9; SPTR: 30S ribosomal protein S9; PFAM: Ribosomal protein S9/S16; Belongs to the universal ribosomal protein uS9 family. | 0.999 |
| rplM | rpsP | Mahau_1894 | Mahau_1057 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | COGs: COG0228 Ribosomal protein S16; InterPro IPR000307: IPR020592; KEGG: bbe:BBR47_36170 30S ribosomal protein S16; PFAM: ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.993 |
| rplM | rpsT | Mahau_1894 | Mahau_1666 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | SSU ribosomal protein S20P; Binds directly to 16S ribosomal RNA. | 0.992 |
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