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STRINGSTRING
Mettu_0009 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_0009" - annotation not available in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_0009annotation not available (45 aa)    
Predicted Functional Partners:
Mettu_0008
Di-trans,poly-cis-decaprenylcistransferase; KEGG- hor-Hore_14480 di-trans-poly-cis-decaprenylcistransferase; PFAM- Di-trans-poly-cis-decaprenylcistransferase-like (204 aa)
              0.845
Mettu_0007
Cupin region; Manually curated; KEGG- dar-Daro_2075 cupin region (130 aa)
              0.566
Mettu_0010
annotation not available (75 aa)
              0.540
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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